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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858462.1_cds_XP_016513911.1_26411
CDS Infomation

[gene=LOC107830779] [db_xref=GeneID:107830779] [protein=phospholipid--sterol O-acyltransferase-like] [protein_id=XP_016513911.1] [location=complement(join(16018..16099,16184..16268,16344..16448,20800..20968,21855..21926,22722..22773,23262..23356,24396..24495,26082..26256,26334..26547,26871..26947,27045..27214,27985..28129,30129..30264,32173..32382))] [gbkey=CDS]
Sequence

ATGAGAGGAGGACACGTGTGCATCGTCGTCAGTTTCCTCCTCCTCCTAGCTGCCCTTAAC
GGGGAGTTCGCCGGCGATTACTCGAAGCTGTCGGGAATTATCATCCCAGGGTTCGCGTCC
ACCCAACTGAGAGCATGGTCAATATTGGACTGCCCTTATTCTCCTCTGGATTTCAATCCT
CTCGATTTAGTCTGGCTCGACACCACCAAACTTCTTTCTGCTGTGAATTGCTGGCTGAAG
TGCATGATGTTAGATCCTTACAATCAAACAGATCACCGGGAATGCAAGTCTCGACCTGAT
AGTGGCCTTTCTGCTATCACGGAGCTTGATCCGGGATACATTACAGGTCCTCTGTCATCA
GTGTGGAAAGAATGGGTTAAGTGGTGCATTGAATTTGGTATCGAGGCTAATGCAATCATT
GCAGTTCCATATGACTGGAGATTGTCTCCATCAAAGCTTGAGGAGCGAGATCTTTACTTT
CACAAACTAAAGCTAACTTTTGAAACTGCTCTTAAACTTCGTGGTGGGCCTTCAATAGTT
TTCGCTCATTCATTAGGTAACAATGTCTTTAGATACTTCTTGGAGTGGTTGAAATTAGAG
ATTGCTCCAAAAGAGTATTTGCGATGGCTAGACGATCACATTCATGCCTATTTTGCTGTT
GGAGCTCCTCTTCTTGGTGCTATTGAGACAGTCAAAGCAACATTATCGGGGGCTACATTT
GGTCTTCCTGTTTCTGAGGGGACAGCTCGCCTGATGTTCAATACTTTTGGATCTTCTATG
TGGATGTTGCCATTTTCAAAATATTGTACAACAGATAATGTGTACAGGAGGCATTTCTCT
GGCGGAGACCGGAAAAACCATCACGCCTACCATTGCGATGAGCATGAGCGTCAATCAAAC
TATTCTGGCTGGCCAACAAACATAATCAATATTGAAGTTCCTTCAATTCGAGGGGATAAA
GCTTATCCATCATTCGTAGAAATTGCCCAAGCTAACTTGTCTGGAATGGAATGTGGATTT
CCAACGCAATTGTCTTTTTCTGCTCGCGAAGTCTCTGATGGGACCTTTTTCAAAGCCATA
AAGGATTATGATCCTGATAGCGAAAGGCTCTTGTACCTTTTACAAAAGTCTTACCATGCC
GATCCGATTTTAAATCCTCTAACACCTTGGGAAAGACCACCTCTCAAGAACATATTCTGC
ATTTATGGCATAGATTCGAAGACTGAGGTTGGTTACTATTTTGCACCCAGTGGGAAGCCT
TATCCTGATAATTGGATTATAACAGATGTGATATATGAAATTGAAGGATCTCTGTATTCA
CGGTCAGGGAATCTGGTTGAAGGAAACCCAGGTGCAACAAGTGGGGATGAGACGGTGCCA
TACCATTCTCTCTCCTGGTGCAAGAATTGGCTGGGGCCAAAAGTGAACATAACAAGGACA
CCACAGTCAGAGCATGATGGCTCAGATGTACAAGTGCATCGAAATATAGAGCACCAACAT
GGAGAAGATATCATTCCCAATATGACAAGGTTACCTACGGTGAAGTACATAACCTATTAT
GAGGATTCTGAAAGTTTTCCAGGAAAGAGAACAGCAGTTTGGGAGCTTGATAAAGCAAAT
CACAGGAACATTGTCAGATCTCCGGTTTTGATGCGGGAGCTGTGGCTTGAGATGTGGCAT
GATATTCATCCGGATAAAAAGTCTAACTTTGTTACAAAAGCAAAGCGTGGGCCTCTGAGG
GATGAGGACTGCTATTGGGATTATGGAAAAGCCCGATGCGCATGGCCTGAACATTGTGAA
TACAGATATTTATTCGGGGATGTTCACCTGGGGCAGAGTTGCAGATTGAAGAATTCTACA
TATGATCTCCTGTCGCACTATGTATGA

Peptide Sequence

PEP ID

XP_016513911.1
PEP Infomation

PREDICTED: phospholipid--sterol O-acyltransferase-like [Nicotiana tabacum]
Sequence

MRGGHVCIVVSFLLLLAALNGEFAGDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNP
LDLVWLDTTKLLSAVNCWLKCMMLDPYNQTDHRECKSRPDSGLSAITELDPGYITGPLSS
VWKEWVKWCIEFGIEANAIIAVPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSIV
FAHSLGNNVFRYFLEWLKLEIAPKEYLRWLDDHIHAYFAVGAPLLGAIETVKATLSGATF
GLPVSEGTARLMFNTFGSSMWMLPFSKYCTTDNVYRRHFSGGDRKNHHAYHCDEHERQSN
YSGWPTNIINIEVPSIRGDKAYPSFVEIAQANLSGMECGFPTQLSFSAREVSDGTFFKAI
KDYDPDSERLLYLLQKSYHADPILNPLTPWERPPLKNIFCIYGIDSKTEVGYYFAPSGKP
YPDNWIITDVIYEIEGSLYSRSGNLVEGNPGATSGDETVPYHSLSWCKNWLGPKVNITRT
PQSEHDGSDVQVHRNIEHQHGEDIIPNMTRLPTVKYITYYEDSESFPGKRTAVWELDKAN
HRNIVRSPVLMRELWLEMWHDIHPDKKSNFVTKAKRGPLRDEDCYWDYGKARCAWPEHCE
YRYLFGDVHLGQSCRLKNSTYDLLSHYV

Transcript Sequence

Gene sequence data has not been registered.